Browse of TCMCG066C01010 protein

CDS

Accession Number	TCMCG066C01010
gbkey	CDS
Protein Id	XP_034604544.1
Location	complement(join(7869182..7869253,7869351..7869524,7869613..7869756,7869851..7869958,7871006..7871144,7871220..7871285,7871413..7871518,7871626..7871757,7871845..7872154,7872251..7872319,7873070..7873413,7873494..7873564,7874267..7874454,7874565..7874827,7876034..7876196,7876748..7877310,7877398..7877590,7877692..7877874,7878463..7878583,7879259..7879356,7879617..7879721,7880400..7880482,7881008..7881159,7881522..7881582,7881861..7882125,7882219..7882351,7882637..7882839))
Gene	LOC117864516
GeneID	117864516
Organism	Setaria viridis

Protein

Length	1502aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034748653.1
Definition	nuclear pore complex protein NUP160 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Nucleoporin Nup120/160
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14303        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0006403        [VIEW IN EMBL-EBI] GO:0006405        [VIEW IN EMBL-EBI] GO:0006406        [VIEW IN EMBL-EBI] GO:0006611        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006886        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0008104        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009409        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009733        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0015031        [VIEW IN EMBL-EBI] GO:0015833        [VIEW IN EMBL-EBI] GO:0015931        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016973        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0031503        [VIEW IN EMBL-EBI] GO:0031965        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033036        [VIEW IN EMBL-EBI] GO:0034613        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042886        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045184        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0050657        [VIEW IN EMBL-EBI] GO:0050658        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051028        [VIEW IN EMBL-EBI] GO:0051168        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051236        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0070727        [VIEW IN EMBL-EBI] GO:0071166        [VIEW IN EMBL-EBI] GO:0071426        [VIEW IN EMBL-EBI] GO:0071427        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCCGCCCCCGCCACCCGAAGGATCGTTGGTGCTGAGGTCCCCATCCCCGGTTCTGACAAACTGCGGTGGATCGACCTCACCGTCCCCTCCTCCTCACCCGCGCCGGCGAGCTCCGCCGATCCCTTCGTCTGCGTGCCTCCGCGCGCCGCCTCGGGATGCCATATCATCCCTTTGGGAGATTCTCAGTGTTACCTCTCGTGGAGGATTCACGAGGAACACCTAAATGTGCTAGAGGTCATTGAACTTGGCGCTTCCAAGGAGTTCCCTAGCTCTGGACTGCGGTTGGTCTTCCAGGAGGCGCTATGTCCATTTGCCTTTTTATGTGAACGAGAGGGTCACAGGCGAGGGGAGCTTGTATATATGTTATATGCGCTTACTGTTTCTGGGGTTGCTATCTTGTGCCACTTACGCAGCCCATTTTCTTACGTATCTGGTTCAGTACTGCATCAGGATGATATAGTTGAGTTTAGTCTCCAAACTCATGCTCAGAGTGCAAAGGTTACAGCAGTAACAGCAAAGCCAGGATGTATAGTGATTGGTCGGCAAGATGGGTCCATCTGTTCTTACAGTCTTGGCAAGTTAGCTCCAAACTCACCAGGCTTCTTGAATGAGCTGCGAGATGATGCTGGGATTGGGCGTTTATGGACTCTCATGTCGAGAACCAGGACTGTGGGTCCTGTGCAGGATATAGTGGCAACTGTCGTAAATGAAAGGGACCTGTTATTTGTTCTTCATTTAGATGGACATTTGCGCATATGGGATAATCACACGAAACTTCTCAACTATAATGTTTGCTCAAATGATATTGAAGGCCATCCGTCCAGACTATGGGTTGGTGAGGCCGATGATGATCAAGAAATGATATCTTTGGCAGTTCTGCATCAGAACACTGTGGTTCAAGATTGTGATCATGTTGCATTGTATGGCTTCAGTTTTTCTACTGGGGAAAAGTTCCCATTCTCTCCTGAACCTTCAATTTCTACTGTACCTTTGCTGGAGGGGAAGCTTGTCGACTTGAAAATAGGCAAGGACAAGCTTTGGATACTTAAAGAATTTGGATCGATGCTGTATGAAATATTGCAGTATGACACCAAAGCTGAGAAAATTTGCTCTTATGTGCTACAAGAAGACGCTATCAGTGAGCAATTGTTTCAAAGTTCAGACAATGCATTGGATGATTTGGTCTGGACAGCTGATTCAGTGTTCTCCTCCTTGAAGGAACAGGCTTTCACTTTTATTTCATCTATGTTTCTGCGGAGGCTACTTCAACCAGGAGTAAACCACTGTTCTGCTCTTCGTGAAACCTTATTAGAGCACAAAAGGTTTCTGTCAGATTCTGAGTTCCAGTCACTTACAGCTAATGGACTACGAAAAGAGATATTATCCATTATAGAACAAGAGGTAAGTTCACAGACAGCGAGTGCTACAGCCTATCACTGGAAAAAATTCTGTGCACGATATCTCCACAATTGGTGCTGGAATAATAGGCCATATGGGTTGCTTCTTGATACTAACAAAGAAGTGTTTGGTTTGATAAGAAAGGGTTCATTTTCCCTGTTCCGTTGTTTGGAGGGTGTGGAGATGCTTATTTATGGTTCATCCGATGAACTGCGCAATATTGATGACCTAGGGATGAACTTAATGGATGCTGACATTGAACTTCTCAATGAAGTCCTTAGGTGCATGGGCCATATACACCATCTGCTGGGGAGATCTTCCACTGCAATATATTACGAGTCCCTTATCAGTTCTGTTATATCATCTGATGAAATTGCTTCGCAAATAGTAAAGATTCTAGAGACTGGTTTTAGTCCTCAATCATCCTCATCCCTCGTTACATTACTTGGAACGGATGCTTATGTAGAAAGAAGGCAGGCGGCTCACAAAAGTCAAAGGAAGTTTTCTGTTGATATGTTACTATCTTTTCATAAGTTGCGATCAAGATCCGCATCCTGGTCCGTGGTATTCGATGTGATCGAGAAGTTTATGAAGTGTTTGAACACAAACATCAACGTACAAGACTATGAATCAAAGAGAGTTTGTAATGTAAATTCTGTGTTATTAGTTCAAGCTACTTCACAGGTTGCAAGGACGATGTTTGAGTCTGCTTTTGATCTATTTCTGTTCCTCAGTTATCTGGTTGGTGTTGGTGGGCAGGTCTCCTTGTTGCAAAGTGATGTTGCCAGAATAAAACTGAAGTTGTTCCCAATGATTCAAGACATATTGGGACAATGGATTGTTCTCCACTTTGTAGGAATCTCACCAACATCACCACCAACCATTGAAGATTTTAGCTATCAACTTTCTTCTCTTCAGCTTGGTAAAGTAGATGAGCTGTCTTTGCACAGAAAGCTTGGCTGCTCTGATTTTACATTGGCTTGTTTACTTGATTTTCCAATATCTCCTCGAGTCGGTGTTATGTCACATTGTTTTCCTAGTCCAGTGGAAGTAATCAATCTCGTAAGGAGTTTTAGTAGTTTGATTATGGGTGGAGGAAATTTTGATTGTGTACAGACTTTCTTGGGTTCCACAATTAATCTATCGGCAGTTCTCATCCGCCATGGTCAATATGAAGCTGCTCAGAATCTGCTGGGAATTCTGGAAACATACTTGAACAATGAGAAAGTATCCCGTACTGGTCAGGACGCAGATACTGCATGTTCAGCATATCTTCATCTTAATGGATTTTGCCTTCTGATGCTTGCACATGATGAAGCAAATACAGTTTTGAGAGAATCCAAGGTTCATGATGCTATCCGATGCTTTTTCAGAGCTGCATCCGGCCATGAAGCTTCAAAGGCTCTGCAGAAGTTTTCTTTGGAAACAGGGTTTCAAGTTTCAGGGGAATGCAGATCTATTTCTTTGTGGAGACTTCATTACTATGAGTGGGCAATGCAAATTTTTGAGCAGCACTCCATGAGCGAGGGGGCGTGCCAGTTTGCTCTTGCTGCTCTTGAACAAGTTGACAACATTGTTGATTTAGATAATGGAACTGAAGCCGAGAGCCTTCCGGAGACTGCAGCAATGATTAAAGGACGACTATGGGCTAATGTATTCAAGTACAGCTTGGATTTGAAAAACTTTCAAGATGCATACTGCGCAATAATCTCAAACCCAGATGATGATAGCAAATATATCTGTTTGAGGCGTTTCATCATAGTTCTTTGTGAGCTTGGGGAGACAAAGGTTCTTTGCAACGGAGAGATTCCATTCACTGGTTTGGTAGAGAAAGTGGAGCAAGAGCTCTTCTGGAAGGCTGAGCGCTCAGATCTATCTTCTAGGCCGAATCTCTACAAGGTTCTTTATTCATTTGAAGCATACAGGAACAATTGGAGGAAGGCAGCTGGATACATGTACAGGTACTTCGTTAGATTGAATAGAGAGGGTAATGCAGGTGGCAGCTGCCAACTTCCTCACGTGTTGCAAGAGAGGTTGCATGCTTTATCTGCTGCTATCAACGCATTGCAGCTTGTTGATCCCTCGTTTGCATGGCTTGATTCTGTTTGTGAAGCTGATGATCAAATTTCTCCAAGTAAAAGGCCTCGGAATCTTTTGATGGAGAATTTGGCTTTTGGCACAGATTCTGAGCTTTCTCGATTGCAATTTTGTGTTGACATTGAAATCCTTGAAAAGGAATACACATTAACGAAAGCACAGTTTATGCTCAGCACTGTGAAATCAACATTCAATTTTTCAGAAAGCCAATCTATTGAGTCCCTGATGGATATTCTTATAAACGAGAAATTGTATGACCTGGCCTTCACAATCGTGCTCAAATTTTGGAAGGACTCTGGAATGAAAAGGGAATTGGAGCGTGTCTTTTCAGCTATTGCGCAACAGTGCTGCCCAAACAGATCAGATAAATCAGGGAGAAATTTGACTGACAGTAAACAACTGCTAGTGCTGCCTTCTTCTGAGGATGATGCATGGGATGGCAACATTAAGAGTATTGCTGTGACCCAACAGCTGCAGGGAAACTGCCACTGGGACACCCTTGAACTATTTATGAAGAAATACAATGATCTGCATCCTAGGTTGCCTGTCGTTGTTGCTGAGACGCTTCTTTATACTGATCCCGAGATTGAGCTACCTCTTTGGTTGGTTCAGATGTTCAAGACTAACAAGGCAGGGAACAGGATATGGGGCATGTCTGGGAAAGAGGCAGATCCTGCTGCCTTATTCAGACTCTACATAAACTATGGCCGGCATGCAGAAGCAACCAACTTGCTGGTGGAGTACCTGGAGTTGTTCGCGTCATCGAGGCCAGCGGACGTCCTCCACCGCAAAAAGATGTCAGCAGCTTGGTTCCCGTACACCGCCGTCGAGAGGCTGTGGTGCCATCTTGGGGAGATGCAGCGCGCCGGCCACAGCGTGGATCAGTGCGACCGGCTCAAGAAGCTGCTGCACGGAGCCCTGATGAGCCATCTGCAGCAGGTCGTGGTTGACTCGGAGGACGTGCTGTCGTCAGTTGGAGGTGGTCAGGGAATGGAGGGCCAGAGCAACTGA

Protein:   MAAPATRRIVGAEVPIPGSDKLRWIDLTVPSSSPAPASSADPFVCVPPRAASGCHIIPLGDSQCYLSWRIHEEHLNVLEVIELGASKEFPSSGLRLVFQEALCPFAFLCEREGHRRGELVYMLYALTVSGVAILCHLRSPFSYVSGSVLHQDDIVEFSLQTHAQSAKVTAVTAKPGCIVIGRQDGSICSYSLGKLAPNSPGFLNELRDDAGIGRLWTLMSRTRTVGPVQDIVATVVNERDLLFVLHLDGHLRIWDNHTKLLNYNVCSNDIEGHPSRLWVGEADDDQEMISLAVLHQNTVVQDCDHVALYGFSFSTGEKFPFSPEPSISTVPLLEGKLVDLKIGKDKLWILKEFGSMLYEILQYDTKAEKICSYVLQEDAISEQLFQSSDNALDDLVWTADSVFSSLKEQAFTFISSMFLRRLLQPGVNHCSALRETLLEHKRFLSDSEFQSLTANGLRKEILSIIEQEVSSQTASATAYHWKKFCARYLHNWCWNNRPYGLLLDTNKEVFGLIRKGSFSLFRCLEGVEMLIYGSSDELRNIDDLGMNLMDADIELLNEVLRCMGHIHHLLGRSSTAIYYESLISSVISSDEIASQIVKILETGFSPQSSSSLVTLLGTDAYVERRQAAHKSQRKFSVDMLLSFHKLRSRSASWSVVFDVIEKFMKCLNTNINVQDYESKRVCNVNSVLLVQATSQVARTMFESAFDLFLFLSYLVGVGGQVSLLQSDVARIKLKLFPMIQDILGQWIVLHFVGISPTSPPTIEDFSYQLSSLQLGKVDELSLHRKLGCSDFTLACLLDFPISPRVGVMSHCFPSPVEVINLVRSFSSLIMGGGNFDCVQTFLGSTINLSAVLIRHGQYEAAQNLLGILETYLNNEKVSRTGQDADTACSAYLHLNGFCLLMLAHDEANTVLRESKVHDAIRCFFRAASGHEASKALQKFSLETGFQVSGECRSISLWRLHYYEWAMQIFEQHSMSEGACQFALAALEQVDNIVDLDNGTEAESLPETAAMIKGRLWANVFKYSLDLKNFQDAYCAIISNPDDDSKYICLRRFIIVLCELGETKVLCNGEIPFTGLVEKVEQELFWKAERSDLSSRPNLYKVLYSFEAYRNNWRKAAGYMYRYFVRLNREGNAGGSCQLPHVLQERLHALSAAINALQLVDPSFAWLDSVCEADDQISPSKRPRNLLMENLAFGTDSELSRLQFCVDIEILEKEYTLTKAQFMLSTVKSTFNFSESQSIESLMDILINEKLYDLAFTIVLKFWKDSGMKRELERVFSAIAQQCCPNRSDKSGRNLTDSKQLLVLPSSEDDAWDGNIKSIAVTQQLQGNCHWDTLELFMKKYNDLHPRLPVVVAETLLYTDPEIELPLWLVQMFKTNKAGNRIWGMSGKEADPAALFRLYINYGRHAEATNLLVEYLELFASSRPADVLHRKKMSAAWFPYTAVERLWCHLGEMQRAGHSVDQCDRLKKLLHGALMSHLQQVVVDSEDVLSSVGGGQGMEGQSN